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Understanding the functions of SMC5/6 complex during the generative development in Arabidopsis
Údaje o názvu Understanding the functions of SMC5/6 complex during the generative development in Arabidopsis [rukopis] / Fen Yang Další variantní názvy Understanding functions of STRUCTURAL MAINTENANCE OF CHROMOSOMES 5/6 complex in seed developmet Osobní jméno Yang, Fen, (autor diplomové práce nebo disertace) Překl.náz Understanding functions of STRUCTURAL MAINTENANCE OF CHROMOSOMES 5/6 complex in seed developmet Vyd.údaje 2021 Fyz.popis 84p + 57p appendices : il., grafy, schémata, tab. + 1 CD Poznámka Ved. práce Aleš Pečinka Dal.odpovědnost Pečinka, Aleš, (školitel) Dal.odpovědnost Univerzita Palackého. Katedra buněčné biologie a genetiky (udelovatel akademické hodnosti) Klíč.slova SMC5/6 complex * NSE2 * meiosis * seed development * polyploidy * genome stability * Arabidopsis * SMC5/6 complex * NSE2 * meiosis * seed development * polyploidy * genome stability * Arabidopsis Forma, žánr disertace dissertations MDT (043.3) Země vyd. Česko Jazyk dok. angličtina Druh dok. PUBLIKAČNÍ ČINNOST Titul Ph.D. Studijní program Doktorský Studijní program Biology Studijní obor Molecular and Cell Biology kniha
Kvalifikační práce Staženo Velikost datum zpřístupnění 00225350-237807031.pdf 23 11.1 MB 14.12.2021 Posudek Typ posudku 00225350-opon-212155632.pdf Posudek oponenta 00225350-ved-956912828.pdf Posudek vedoucího 00225350-opon-337851175.pdf Posudek oponenta Průběh obhajoby datum zadání datum odevzdání datum obhajoby přidělená hodnocení typ hodnocení 00225350-prubeh-225192244.pdf 26.10.2016 14.12.2021 05.04.2022 S Hodnocení známkou
The maintenance of genome stability is a vital issue for all organisms. Structural maintenance of chromosomes 5/6 (SMC5/6) complex is a crucial factor for preserving genome stability. Recently, studies in plants showed the SMC5/6 complex is important for plant fertility. However, the mechanism is little known so far. In this thesis, I aimed to investigate the functions of the SMC5/6 complex during generative development in diploid and autotetraploid plants of Arabidopsis (Arabidopsis thaliana). SMC5/6 complex is one of three SMC complexes, which are highly conserved to regulate chromosome architecture and genome organization in eukaryotes. The SMC5/6 complex is well known for its functions in DNA damage repair. We observed that loss-of-function mutations in NSE2 subunit of the SMC5/6 complex cause severe meiotic defects. The first defect is chromosome fragmentation observed in meiosis I, suggesting the SMC5/6 complex is partly required for the repair of SPO11-induced DNA double-strand breaks. The second independent defect is the absence of chromosome segregation in the first and/or the second meiotic division, leading to the formation of unreduced male gametes. The unreduced male gametes result in the production of triploid offspring in nse2 plants. And it may also cause seed abortion as the maternal and paternal genome dosage is disturbed in endosperm. The presence of aborted ovules showed that nse2 plants indicates any defects in female gametogenesis are maternally lethal. Polyploidization is a common phenomenon in the evolution of flowering plants. However, our knowledge about the maintenance of polyploid genome stability is still very limited. Our work uncovered the loss-of-function autotetraploid (4x) mutants of SMC5/6 complex enhance fertility defects, cause severe defects in meiosis, and produce hexaploid and aneuploid progeny, suggesting that the SMC5/6 complex is an important player in the maintenance of tetraploid genome stability. Additional, tetrads with micronuclei were formed in 4x mutant, which were not observed in the case of the diploid (2x) mutant pollen mother cells. Aneuploid offspring were equally caused maternally and paternally in 4x mutant. Rarely, hexaploid plants occurred by unreduced female gametes in 4x nse2 plants. The absence of aneuploidy offspring and the viable unreduced female gametes in 2x mutants sup-ports they are unique phenotypes of tetraploid plants, indicating the importance of certain molecular regulators may be changed when polyploidization occurs. In conclusion, our studies uncover a novel SMC5/6 complex function in the maintenance of gametophytic ploidy in both diploid and autotetraploid Arabidopsis. Our work in diploid and autotetraploid Arabidopsis supports that autotetraploid plants have a generally higher frequency of but also higher tolerance for aneuploidy. Moreover, our results emphasize the importance of studying the consequences of mutations in genes regulating the plant fertility in diploid versus polyploid conditions, which may provide the possibility to increase agri-culturally important traits as many crop species are polyploidy.The maintenance of genome stability is a vital issue for all organisms. Structural maintenance of chromosomes 5/6 (SMC5/6) complex is a crucial factor for preserving genome stability. Recently, studies in plants showed the SMC5/6 complex is important for plant fertility. However, the mechanism is little known so far. In this thesis, I aimed to investigate the functions of the SMC5/6 complex during generative development in diploid and autotetraploid plants of Arabidopsis (Arabidopsis thaliana). SMC5/6 complex is one of three SMC complexes, which are highly conserved to regulate chromosome architecture and genome organization in eukaryotes. The SMC5/6 complex is well known for its functions in DNA damage repair. We observed that loss-of-function mutations in NSE2 subunit of the SMC5/6 complex cause severe meiotic defects. The first defect is chromosome fragmentation observed in meiosis I, suggesting the SMC5/6 complex is partly required for the repair of SPO11-induced DNA double-strand breaks. The second independent defect is the absence of chromosome segregation in the first and/or the second meiotic division, leading to the formation of unreduced male gametes. The unreduced male gametes result in the production of triploid offspring in nse2 plants. And it may also cause seed abortion as the maternal and paternal genome dosage is disturbed in endosperm. The presence of aborted ovules showed that nse2 plants indicates any defects in female gametogenesis are maternally lethal. Polyploidization is a common phenomenon in the evolution of flowering plants. However, our knowledge about the maintenance of polyploid genome stability is still very limited. Our work uncovered the loss-of-function autotetraploid (4x) mutants of SMC5/6 complex enhance fertility defects, cause severe defects in meiosis, and produce hexaploid and aneuploid progeny, suggesting that the SMC5/6 complex is an important player in the maintenance of tetraploid genome stability. Additional, tetrads with micronuclei were formed in 4x mutant, which were not observed in the case of the diploid (2x) mutant pollen mother cells. Aneuploid offspring were equally caused maternally and paternally in 4x mutant. Rarely, hexaploid plants occurred by unreduced female gametes in 4x nse2 plants. The absence of aneuploidy offspring and the viable unreduced female gametes in 2x mutants sup-ports they are unique phenotypes of tetraploid plants, indicating the importance of certain molecular regulators may be changed when polyploidization occurs. In conclusion, our studies uncover a novel SMC5/6 complex function in the maintenance of gametophytic ploidy in both diploid and autotetraploid Arabidopsis. Our work in diploid and autotetraploid Arabidopsis supports that autotetraploid plants have a generally higher frequency of but also higher tolerance for aneuploidy. Moreover, our results emphasize the importance of studying the consequences of mutations in genes regulating the plant fertility in diploid versus polyploid conditions, which may provide the possibility to increase agri-culturally important traits as many crop species are polyploidy.
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